Trying to match
$5 of file1.txt to
$1 of file2.txt and if there is a match copy
$6 of file2.txt and paste it to
$7 of file1.txt. My attempt is below but it does not seem to produce the desired output. Thank you :).
File1.txt
File2.txt
Desired output
Code:
awk 'NR==FNR{A[$5]=$1; next} A[$6] {$6=$6 " " A[$7]}1' file2.txt file1.txt > match.txtCode:
RefPrimer ref antiref omosome PrimerSet SeqRxn Link
AntirefPrimer antiref ref omosome
PXL-A0000005ref 69066 69311 1 PXL-A0000005 SeqRxn4
PXL-A0000005antiref 69311 69066 1
PXL-A0000007ref 69700 70033 1 PXL-A0000007 SeqRxn4
PXL-A0000007antiref 70033 69700 1Code:
PXL-A0000005 chr1 69066 69311 DTE3504500000005 https://www.xxxx.com/add_2_cart.php?catno=PXL-A0000005&storage=lyophilized&rxns=100&num=1&test=mixed&format=tube
PXL-A0000007 chr1 69700 70033 DTE3504500000007 https://www.xxxx.com/add_2_cart.php?catno=PXL-A0000007&storage=lyophilized&rxns=100&num=1&test=mixed&format=tubeCode:
RefPrimer ref antiref omosome PrimerSet SeqRxn Link
AntirefPrimer antiref ref omosome
PXL-A0000005ref 69066 69311 1 PXL-A0000005 SeqRxn4 https://www.xxxx.com/add_2_cart.php?catno=PXL-A0000005&storage=lyophilized&rxns=100&num=1&test=mixed&format=tube
PXL-A0000005antiref 69311 69066 1
PXL-A0000007ref 69700 70033 1 PXL-A0000007 SeqRxn4 https://www.xxxx.com/add_2_cart.php?catno=PXL-A0000007&storage=lyophilized&rxns=100&num=1&test=mixed&format=tube
PXL-A0000007antiref 70033 69700 1