Having trouble modifying the below
awk to match
$1 of sample.txt to
$1 of data.txt and if there is a match, then
$2 of data.txt is copied to
$7 of sample.txt. Thank you :).
Code:
awk 'NR==FNR{A[$1]=$1; next} A[$1] {$1=$1 " " A[$6]}1' data.txt sample.txt > output.txtCode:
Desired Output:
Data Type: ImaGene
Sample Name File Cnt Channel Probe Type Factor:Gender Factor:Control Gender Classfn
1 ./2523097xxxxx_1-31-2013/0_2523097xxxxx_Block1.txt ./2523097xxxxx_1-31-2013/1_2523097xxxxx_Block1.txt Agilent 016267 Female Male Likely_Benign=>chr5:175511777-175710070; Likely_Benign=>chr6:78842630-79075754; Benign=>chr8:39199768-39409984; Benign=>chr14:45789786-46003777
2 ./2523097xxxxx_1-31-2013/0_2523097xxxxx_Block2.txt ./2523097xxxxx_1-31-2013/1_2523097xxxxx_Block2.txt Agilent 016267 Female Male Likely_Benign=>chr3:93794-142515